Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cstf1Q99LC2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Cstf1Q99LC2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Gm8410-201ENSMUST00000117225 605 ntBASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Gm15693-201ENSMUST00000120470 637 ntBASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.15■□□□□ 0.02
Cstf1Q99LC2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Gm13453-201ENSMUST00000118708 357 ntBASIC15.14■□□□□ 0.01
Cstf1Q99LC2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Mir7684-201ENSMUST00000183858 60 ntBASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms