Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcd2Q99JR8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Gm13015-201ENSMUST00000118674 204 ntBASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.28■□□□□ 0.04
Smarcd2Q99JR8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd2Q99JR8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd2Q99JR8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd2Q99JR8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd2Q99JR8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd2Q99JR8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd2Q99JR8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd2Q99JR8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd2Q99JR8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Smarcd2Q99JR8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Smarcd2Q99JR8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Mir7684-201ENSMUST00000183858 60 ntBASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Smarcd2Q99JR8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd2Q99JR8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd2Q99JR8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd2Q99JR8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Smarcd2Q99JR8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd2Q99JR8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd2Q99JR8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Smarcd2Q99JR8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Smarcd2Q99JR8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms