Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Gm23634-201ENSMUST00000175071 91 ntBASIC15.33■□□□□ 0.04
Cdk9Q99J95 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
Cdk9Q99J95 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk9Q99J95 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.32■□□□□ 0.04
Cdk9Q99J95 Gm27389-201ENSMUST00000183622 195 ntBASIC15.32■□□□□ 0.04
Cdk9Q99J95 Gm37722-201ENSMUST00000193757 208 ntBASIC15.32■□□□□ 0.04
Cdk9Q99J95 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdk9Q99J95 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.32■□□□□ 0.04
Cdk9Q99J95 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cdk9Q99J95 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk9Q99J95 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdk9Q99J95 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Gm21559-201ENSMUST00000220638 855 ntBASIC15.31■□□□□ 0.04
Cdk9Q99J95 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Gm8587-201ENSMUST00000076538 843 ntBASIC15.31■□□□□ 0.04
Cdk9Q99J95 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.31■□□□□ 0.04
Cdk9Q99J95 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk9Q99J95 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdk9Q99J95 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.3■□□□□ 0.04
Cdk9Q99J95 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms