Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp1aQ921W0 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Gm7889-201ENSMUST00000185591 958 ntBASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Gm9987-201ENSMUST00000069768 567 ntBASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp1aQ921W0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp1aQ921W0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp1aQ921W0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms