Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb1Q91Y08 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb1Q91Y08 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb1Q91Y08 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb1Q91Y08 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb1Q91Y08 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
Pcdhb1Q91Y08 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
Pcdhb1Q91Y08 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb1Q91Y08 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.77■□□□□ 0.11
Pcdhb1Q91Y08 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb1Q91Y08 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb1Q91Y08 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.77■□□□□ 0.11
Pcdhb1Q91Y08 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb1Q91Y08 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb1Q91Y08 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb1Q91Y08 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb1Q91Y08 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Gm45167-201ENSMUST00000208007 322 ntBASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms