Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb20Q91XZ9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Gm12260-201ENSMUST00000122447 411 ntBASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Gm37684-201ENSMUST00000192779 355 ntBASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 AC153529.1-201ENSMUST00000217818 370 ntBASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb20Q91XZ9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 Dancr-204ENSMUST00000132389 2347 ntBASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 AC163296.2-201ENSMUST00000220177 1315 ntBASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb20Q91XZ9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Gm11893-201ENSMUST00000117829 491 ntBASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Gm15467-201ENSMUST00000120582 445 ntBASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Gm6681-201ENSMUST00000205215 607 ntBASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 CT572999.1-201ENSMUST00000220315 1260 ntBASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb20Q91XZ9 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb20Q91XZ9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms