Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Mir5126-201ENSMUST00000175513 77 ntBASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Gm18195-201ENSMUST00000207604 706 ntBASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb6Q91XZ4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb6Q91XZ4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.58■□□□□ 0.09
Pcdhb6Q91XZ4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb6Q91XZ4 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.58■□□□□ 0.09
Pcdhb6Q91XZ4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Gm43767-201ENSMUST00000198933 381 ntBASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb6Q91XZ4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Mir5131-201ENSMUST00000175426 93 ntBASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb6Q91XZ4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb6Q91XZ4 Gm12350-201ENSMUST00000121208 462 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms