Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga11Q91XY8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga11Q91XY8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhga11Q91XY8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga11Q91XY8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga11Q91XY8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga11Q91XY8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga11Q91XY8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga11Q91XY8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga11Q91XY8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhga11Q91XY8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga11Q91XY8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdhga11Q91XY8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga11Q91XY8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Gm27459-201ENSMUST00000184860 107 ntBASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Gm28659-201ENSMUST00000188013 759 ntBASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga11Q91XY8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Gm15358-201ENSMUST00000119249 520 ntBASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Pcdhga11Q91XY8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga11Q91XY8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms