Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Gm27533-201ENSMUST00000183800 152 ntBASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cspg4Q8VHY0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cspg4Q8VHY0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13□□□□□ -0.33
Cspg4Q8VHY0 Gm8096-201ENSMUST00000209921 1591 ntBASIC13□□□□□ -0.33
Cspg4Q8VHY0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Gm7669-201ENSMUST00000210184 1603 ntBASIC13□□□□□ -0.33
Cspg4Q8VHY0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Gm45668-201ENSMUST00000211271 493 ntBASIC13□□□□□ -0.33
Cspg4Q8VHY0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cspg4Q8VHY0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Gm43703-201ENSMUST00000200523 763 ntBASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Gm15198-201ENSMUST00000117283 177 ntBASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Mir1982-201ENSMUST00000157368 74 ntBASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Gm42612-201ENSMUST00000197986 623 ntBASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Gm43170-201ENSMUST00000199827 612 ntBASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cspg4Q8VHY0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Gm29667-201ENSMUST00000190817 490 ntBASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms