Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps39Q8R5L3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps39Q8R5L3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps39Q8R5L3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.22■□□□□ 0.03
Vps39Q8R5L3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Gm8318-201ENSMUST00000182954 872 ntBASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps39Q8R5L3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Vps39Q8R5L3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Vps39Q8R5L3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.21■□□□□ 0.02
Vps39Q8R5L3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps39Q8R5L3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms