Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx54Q8K4L0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Gm12742-201ENSMUST00000117326 410 ntBASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 AC159006.1-201ENSMUST00000226396 258 ntBASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Gm9797-201ENSMUST00000052902 613 ntBASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx54Q8K4L0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Gm4984-201ENSMUST00000115987 360 ntBASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Gm31326-201ENSMUST00000191856 1048 ntBASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 AC155286.1-201ENSMUST00000218632 448 ntBASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx54Q8K4L0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Gm9002-201ENSMUST00000178437 499 ntBASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Gm16476-201ENSMUST00000221544 139 ntBASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx54Q8K4L0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Mir1982-201ENSMUST00000157368 74 ntBASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Gm45841-201ENSMUST00000207700 164 ntBASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Gm45331-201ENSMUST00000209868 554 ntBASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Dupd1-202ENSMUST00000224735 548 ntBASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx54Q8K4L0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx54Q8K4L0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx54Q8K4L0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx54Q8K4L0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx54Q8K4L0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx54Q8K4L0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx54Q8K4L0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx54Q8K4L0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.69■□□□□ 0.74
Ddx54Q8K4L0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms