Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Celf4-206ENSMUST00000224553 1729 ntBASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.96■□□□□ 0.47
Cchcr1Q8K2I2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Gm7977-201ENSMUST00000193787 748 ntBASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cchcr1Q8K2I2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cchcr1Q8K2I2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cchcr1Q8K2I2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms