Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfwd3Q8CIK8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Gm18489-201ENSMUST00000172565 551 ntBASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 App-207ENSMUST00000227737 2827 ntBASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfwd3Q8CIK8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Gm13036-201ENSMUST00000117799 748 ntBASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rfwd3Q8CIK8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfwd3Q8CIK8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfwd3Q8CIK8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms