Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rp1l1Q8CGM2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rp1l1Q8CGM2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rp1l1Q8CGM2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rp1l1Q8CGM2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rp1l1Q8CGM2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rp1l1Q8CGM2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Rp1l1Q8CGM2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rp1l1Q8CGM2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rp1l1Q8CGM2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Rp1l1Q8CGM2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rp1l1Q8CGM2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rp1l1Q8CGM2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Gm12341-201ENSMUST00000119724 503 ntBASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rp1l1Q8CGM2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rp1l1Q8CGM2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rp1l1Q8CGM2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Rp1l1Q8CGM2 Gm12390-201ENSMUST00000117897 397 ntBASIC15.52■□□□□ 0.07
Rp1l1Q8CGM2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.52■□□□□ 0.07
Rp1l1Q8CGM2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.52■□□□□ 0.07
Rp1l1Q8CGM2 Gm9002-201ENSMUST00000178437 499 ntBASIC15.52■□□□□ 0.07
Rp1l1Q8CGM2 Gm37230-201ENSMUST00000194491 818 ntBASIC15.52■□□□□ 0.07
Rp1l1Q8CGM2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rp1l1Q8CGM2 Gm5356-201ENSMUST00000093326 615 ntBASIC15.52■□□□□ 0.07
Rp1l1Q8CGM2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rp1l1Q8CGM2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rp1l1Q8CGM2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rp1l1Q8CGM2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms