Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps53Q8CCB4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm26308-201ENSMUST00000157768 69 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm8825-201ENSMUST00000182565 998 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm4518-201ENSMUST00000182638 718 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vps53Q8CCB4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps53Q8CCB4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Gm10175-201ENSMUST00000086013 645 ntBASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps53Q8CCB4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Gm25911-201ENSMUST00000157621 56 ntBASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Mir3113-201ENSMUST00000175478 76 ntBASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Mir8117-201ENSMUST00000184773 107 ntBASIC17.62■□□□□ 0.41
Vps53Q8CCB4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps53Q8CCB4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.61■□□□□ 0.41
Vps53Q8CCB4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms