Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.04■□□□□ -0
Aph1bQ8C7N7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Gm10499-201ENSMUST00000174094 934 ntBASIC15.03■□□□□ -0
Aph1bQ8C7N7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Aph1bQ8C7N7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.02■□□□□ -0
Aph1bQ8C7N7 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.02■□□□□ -0
Aph1bQ8C7N7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Gm12134-201ENSMUST00000122109 520 ntBASIC15.02■□□□□ -0
Aph1bQ8C7N7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.02■□□□□ -0
Aph1bQ8C7N7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Aph1bQ8C7N7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Aph1bQ8C7N7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Aph1bQ8C7N7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Aph1bQ8C7N7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Aph1bQ8C7N7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Aph1bQ8C7N7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Aph1bQ8C7N7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Aph1bQ8C7N7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Aph1bQ8C7N7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Aph1bQ8C7N7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm44357-201ENSMUST00000195897 142 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm19658-201ENSMUST00000196231 138 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm44367-201ENSMUST00000196836 138 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm44350-201ENSMUST00000197197 138 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm44390-201ENSMUST00000197533 144 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm44313-201ENSMUST00000198018 138 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm44486-201ENSMUST00000198508 138 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm44314-201ENSMUST00000199263 138 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm44394-201ENSMUST00000199558 138 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm44484-201ENSMUST00000199873 138 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm44466-201ENSMUST00000200264 138 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm44359-201ENSMUST00000200671 138 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm18669-201ENSMUST00000216049 778 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Aph1bQ8C7N7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms