Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Usp44Q8C2S0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp44Q8C2S0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp44Q8C2S0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.74■□□□□ 0.43
Usp44Q8C2S0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp44Q8C2S0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp44Q8C2S0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp44Q8C2S0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp44Q8C2S0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp44Q8C2S0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.74■□□□□ 0.43
Usp44Q8C2S0 Gm2272-201ENSMUST00000194903 582 ntBASIC17.74■□□□□ 0.43
Usp44Q8C2S0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Usp44Q8C2S0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp44Q8C2S0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.74■□□□□ 0.43
Usp44Q8C2S0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Gm5177-201ENSMUST00000183092 997 ntBASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp44Q8C2S0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Gm18206-201ENSMUST00000207027 926 ntBASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp44Q8C2S0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Usp44Q8C2S0 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.71■□□□□ 0.42
Usp44Q8C2S0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Gm16198-201ENSMUST00000118766 670 ntBASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Gm45747-201ENSMUST00000212203 999 ntBASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp44Q8C2S0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp44Q8C2S0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms