Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Sh3rf3Q8C120 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Gm10060-201ENSMUST00000212002 111 ntBASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Gm7461-201ENSMUST00000058918 827 ntBASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf3Q8C120 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Gm7222-201ENSMUST00000117512 906 ntBASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Gm10499-201ENSMUST00000174094 934 ntBASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Gm27741-201ENSMUST00000185060 237 ntBASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sh3rf3Q8C120 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf3Q8C120 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms