Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Gm6991-201ENSMUST00000218475 1178 ntBASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lsm11Q8BUV6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm8825-201ENSMUST00000182565 998 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm4518-201ENSMUST00000182638 718 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm11Q8BUV6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms