Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptpn7Q8BUM3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptpn7Q8BUM3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Ptpn7Q8BUM3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ptpn7Q8BUM3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Gm8344-201ENSMUST00000119813 856 ntBASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ptpn7Q8BUM3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Gm4459-201ENSMUST00000118750 468 ntBASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Gm12497-201ENSMUST00000138778 237 ntBASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Gm7506-201ENSMUST00000207758 815 ntBASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ptpn7Q8BUM3 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.21□□□□□ -0.14
Ptpn7Q8BUM3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ptpn7Q8BUM3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Ptpn7Q8BUM3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ptpn7Q8BUM3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ptpn7Q8BUM3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ptpn7Q8BUM3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ptpn7Q8BUM3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Gm33142-201ENSMUST00000193913 867 ntBASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ptpn7Q8BUM3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms