Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne3Q8BT60 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne3Q8BT60 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne3Q8BT60 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne3Q8BT60 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cpne3Q8BT60 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne3Q8BT60 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne3Q8BT60 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Gm8344-201ENSMUST00000119813 856 ntBASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Gm12895-201ENSMUST00000122214 226 ntBASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne3Q8BT60 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Gm17807-201ENSMUST00000186869 298 ntBASIC14.68□□□□□ -0.06
Cpne3Q8BT60 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne3Q8BT60 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Gm12644-201ENSMUST00000119935 606 ntBASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cpne3Q8BT60 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Gm15372-201ENSMUST00000120729 834 ntBASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Gm8655-201ENSMUST00000221159 852 ntBASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne3Q8BT60 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms