Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Gm2810-201ENSMUST00000118681 990 ntBASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Gm15483-201ENSMUST00000120338 456 ntBASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Gm24158-201ENSMUST00000175263 71 ntBASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Gm7774-201ENSMUST00000200064 533 ntBASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scfd1Q8BRF7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 AA543401-201ENSMUST00000164248 1269 ntBASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Scfd1Q8BRF7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scfd1Q8BRF7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scfd1Q8BRF7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scfd1Q8BRF7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scfd1Q8BRF7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Scfd1Q8BRF7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Scfd1Q8BRF7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scfd1Q8BRF7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scfd1Q8BRF7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scfd1Q8BRF7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms