Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Gm11780-201ENSMUST00000136880 516 ntBASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn3Q8BHH8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn3Q8BHH8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn3Q8BHH8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Clrn3Q8BHH8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.27□□□□□ -0.12
Clrn3Q8BHH8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn3Q8BHH8 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.27□□□□□ -0.12
Clrn3Q8BHH8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn3Q8BHH8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn3Q8BHH8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn3Q8BHH8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clrn3Q8BHH8 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.27□□□□□ -0.12
Clrn3Q8BHH8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Gm6376-201ENSMUST00000209407 580 ntBASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clrn3Q8BHH8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Mir8098-201ENSMUST00000184011 137 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm44357-201ENSMUST00000195897 142 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm19658-201ENSMUST00000196231 138 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm44367-201ENSMUST00000196836 138 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm44350-201ENSMUST00000197197 138 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm44390-201ENSMUST00000197533 144 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm44313-201ENSMUST00000198018 138 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm44486-201ENSMUST00000198508 138 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm44314-201ENSMUST00000199263 138 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm44394-201ENSMUST00000199558 138 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm44484-201ENSMUST00000199873 138 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm44466-201ENSMUST00000200264 138 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm44359-201ENSMUST00000200671 138 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clrn3Q8BHH8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms