Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Depdc1bQ8BH88 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.52■□□□□ 0.24
Depdc1bQ8BH88 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Depdc1bQ8BH88 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Depdc1bQ8BH88 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Depdc1bQ8BH88 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Depdc1bQ8BH88 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Depdc1bQ8BH88 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Depdc1bQ8BH88 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Depdc1bQ8BH88 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Depdc1bQ8BH88 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Depdc1bQ8BH88 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Gm6550-201ENSMUST00000187574 993 ntBASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Depdc1bQ8BH88 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Psmb5-202ENSMUST00000227257 622 ntBASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Depdc1bQ8BH88 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Gm7222-201ENSMUST00000117512 906 ntBASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Depdc1bQ8BH88 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms