Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17■□□□□ 0.31
Trnp1Q80ZI1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
Trnp1Q80ZI1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Gm8602-201ENSMUST00000184045 607 ntBASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Dupd1-202ENSMUST00000224735 548 ntBASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trnp1Q80ZI1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trnp1Q80ZI1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm13829-201ENSMUST00000119600 138 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm9522-201ENSMUST00000182394 926 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm29310-201ENSMUST00000185468 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21825-201ENSMUST00000185728 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm29109-201ENSMUST00000185895 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21896-201ENSMUST00000186520 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21873-201ENSMUST00000186728 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21794-201ENSMUST00000187056 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21880-201ENSMUST00000187275 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21826-201ENSMUST00000187451 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21198-201ENSMUST00000188393 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21749-201ENSMUST00000189343 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21901-201ENSMUST00000189568 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm29424-201ENSMUST00000189716 696 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms