Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.57■□□□□ 0.24
Ush1gQ80T11 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.57■□□□□ 0.24
Ush1gQ80T11 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Gm8318-201ENSMUST00000182954 872 ntBASIC16.57■□□□□ 0.24
Ush1gQ80T11 Gm43125-201ENSMUST00000201724 730 ntBASIC16.57■□□□□ 0.24
Ush1gQ80T11 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ush1gQ80T11 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.56■□□□□ 0.24
Ush1gQ80T11 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.56■□□□□ 0.24
Ush1gQ80T11 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Gm27430-201ENSMUST00000184585 107 ntBASIC16.56■□□□□ 0.24
Ush1gQ80T11 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Gm44333-201ENSMUST00000197168 107 ntBASIC16.56■□□□□ 0.24
Ush1gQ80T11 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ush1gQ80T11 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.55■□□□□ 0.24
Ush1gQ80T11 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.55■□□□□ 0.24
Ush1gQ80T11 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.55■□□□□ 0.24
Ush1gQ80T11 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ush1gQ80T11 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms