Protein–RNA interactions for Protein: Q7TQK5

Ccdc93, Coiled-coil domain-containing protein 93, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc93Q7TQK5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc93Q7TQK5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc93Q7TQK5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc93Q7TQK5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc93Q7TQK5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc93Q7TQK5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc93Q7TQK5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc93Q7TQK5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ccdc93Q7TQK5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Gm8410-201ENSMUST00000117225 605 ntBASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Gm14722-201ENSMUST00000118943 689 ntBASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc93Q7TQK5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Gm6888-201ENSMUST00000221983 706 ntBASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc93Q7TQK5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc93Q7TQK5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc93Q7TQK5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc93Q7TQK5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc93Q7TQK5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc93Q7TQK5 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc93Q7TQK5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc93Q7TQK5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.15■□□□□ 0.5
Ccdc93Q7TQK5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms