Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lsm8Q6ZWM4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lsm8Q6ZWM4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lsm8Q6ZWM4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lsm8Q6ZWM4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lsm8Q6ZWM4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Gm2651-201ENSMUST00000203560 838 ntBASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Gm18246-201ENSMUST00000221023 728 ntBASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lsm8Q6ZWM4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Gm27628-201ENSMUST00000184911 107 ntBASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lsm8Q6ZWM4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lsm8Q6ZWM4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.87■□□□□ 0.13
Lsm8Q6ZWM4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms