Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.12■□□□□ 0.01
Ssx9Q6XAS3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Ssx9Q6XAS3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.12■□□□□ 0.01
Ssx9Q6XAS3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.12■□□□□ 0.01
Ssx9Q6XAS3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssx9Q6XAS3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssx9Q6XAS3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssx9Q6XAS3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssx9Q6XAS3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssx9Q6XAS3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssx9Q6XAS3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssx9Q6XAS3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
Ssx9Q6XAS3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Celf4-206ENSMUST00000224553 1729 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gm44357-201ENSMUST00000195897 142 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gm19658-201ENSMUST00000196231 138 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gm44367-201ENSMUST00000196836 138 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gm44350-201ENSMUST00000197197 138 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gm44390-201ENSMUST00000197533 144 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gm44313-201ENSMUST00000198018 138 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gm44486-201ENSMUST00000198508 138 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gm44314-201ENSMUST00000199263 138 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gm44394-201ENSMUST00000199558 138 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gm44484-201ENSMUST00000199873 138 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gm44466-201ENSMUST00000200264 138 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gm44359-201ENSMUST00000200671 138 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx9Q6XAS3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx9Q6XAS3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx9Q6XAS3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.09■□□□□ 0.01
Ssx9Q6XAS3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ssx9Q6XAS3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ssx9Q6XAS3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx9Q6XAS3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx9Q6XAS3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ssx9Q6XAS3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx9Q6XAS3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms