Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Mir6990-201ENSMUST00000183724 91 ntBASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Gm43474-201ENSMUST00000196415 774 ntBASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Npc1l1Q6T3U4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Gm25948-201ENSMUST00000175334 112 ntBASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Gm43767-201ENSMUST00000198933 381 ntBASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Npc1l1Q6T3U4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Gm9385-201ENSMUST00000117563 472 ntBASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Gm18889-201ENSMUST00000174284 929 ntBASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.11■□□□□ 0.49
Npc1l1Q6T3U4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1l1Q6T3U4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms