Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rad54bQ6PFE3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rad54bQ6PFE3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rad54bQ6PFE3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rad54bQ6PFE3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Gm27646-201ENSMUST00000183989 110 ntBASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rad54bQ6PFE3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rad54bQ6PFE3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rad54bQ6PFE3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Gm43767-201ENSMUST00000198933 381 ntBASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Gm6296-201ENSMUST00000222599 943 ntBASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Rad54bQ6PFE3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rad54bQ6PFE3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.25■□□□□ 0.03
Rad54bQ6PFE3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rad54bQ6PFE3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rad54bQ6PFE3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rad54bQ6PFE3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rad54bQ6PFE3 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.25■□□□□ 0.03
Rad54bQ6PFE3 Gm12644-201ENSMUST00000119935 606 ntBASIC15.25■□□□□ 0.03
Rad54bQ6PFE3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rad54bQ6PFE3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rad54bQ6PFE3 Gm23547-201ENSMUST00000158210 271 ntBASIC15.25■□□□□ 0.03
Rad54bQ6PFE3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms