Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcc2Q6PDG5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Gm11764-201ENSMUST00000120221 623 ntBASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc2Q6PDG5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Gm37153-201ENSMUST00000193637 231 ntBASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc2Q6PDG5 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Gm27525-201ENSMUST00000184465 107 ntBASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Psmb5-202ENSMUST00000227257 622 ntBASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc2Q6PDG5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms