Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcd3Q6P9Z1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcd3Q6P9Z1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Smarcd3Q6P9Z1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcd3Q6P9Z1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcd3Q6P9Z1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcd3Q6P9Z1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Gm19164-201ENSMUST00000210667 640 ntBASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd3Q6P9Z1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd3Q6P9Z1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Efs-202ENSMUST00000227037 2540 ntBASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms