Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Birc2-201ENSMUST00000054878 378 ntBASIC17.02■□□□□ 0.32
Abcf1Q6P542 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abcf1Q6P542 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abcf1Q6P542 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abcf1Q6P542 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Abcf1Q6P542 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Abcf1Q6P542 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abcf1Q6P542 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abcf1Q6P542 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.02■□□□□ 0.31
Abcf1Q6P542 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abcf1Q6P542 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Abcf1Q6P542 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Abcf1Q6P542 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Abcf1Q6P542 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abcf1Q6P542 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Gm15165-201ENSMUST00000118140 502 ntBASIC17.01■□□□□ 0.31
Abcf1Q6P542 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Gm12644-201ENSMUST00000119935 606 ntBASIC17.01■□□□□ 0.31
Abcf1Q6P542 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.01■□□□□ 0.31
Abcf1Q6P542 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf1Q6P542 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Abcf1Q6P542 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Abcf1Q6P542 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Abcf1Q6P542 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17■□□□□ 0.31
Abcf1Q6P542 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Gm43347-201ENSMUST00000200226 580 ntBASIC17■□□□□ 0.31
Abcf1Q6P542 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Abcf1Q6P542 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Abcf1Q6P542 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf1Q6P542 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Abcf1Q6P542 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.99■□□□□ 0.31
Abcf1Q6P542 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.99■□□□□ 0.31
Abcf1Q6P542 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abcf1Q6P542 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms