Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm44357-201ENSMUST00000195897 142 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm19658-201ENSMUST00000196231 138 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm44367-201ENSMUST00000196836 138 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm44350-201ENSMUST00000197197 138 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm44390-201ENSMUST00000197533 144 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm44313-201ENSMUST00000198018 138 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm44486-201ENSMUST00000198508 138 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm44314-201ENSMUST00000199263 138 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm44394-201ENSMUST00000199558 138 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm44484-201ENSMUST00000199873 138 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm44466-201ENSMUST00000200264 138 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm44359-201ENSMUST00000200671 138 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm34391-201ENSMUST00000203706 907 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Birc2-201ENSMUST00000054878 378 ntBASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf6Q6NVF9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Gm13418-201ENSMUST00000119097 944 ntBASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf6Q6NVF9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Gm8318-201ENSMUST00000182954 872 ntBASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf6Q6NVF9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cpsf6Q6NVF9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.71□□□□□ -0.06
Cpsf6Q6NVF9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms