Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga7Q6DD96 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga7Q6DD96 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhga7Q6DD96 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga7Q6DD96 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga7Q6DD96 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga7Q6DD96 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Gm12895-201ENSMUST00000122214 226 ntBASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga7Q6DD96 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Gm8655-201ENSMUST00000221159 852 ntBASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga7Q6DD96 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.75□□□□□ -0.05
Pcdhga7Q6DD96 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga7Q6DD96 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga7Q6DD96 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga7Q6DD96 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms