Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Scube3Q66PY1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Scube3Q66PY1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scube3Q66PY1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Scube3Q66PY1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scube3Q66PY1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scube3Q66PY1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scube3Q66PY1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scube3Q66PY1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Scube3Q66PY1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scube3Q66PY1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scube3Q66PY1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.94■□□□□ 0.14
Scube3Q66PY1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Scube3Q66PY1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Scube3Q66PY1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.93■□□□□ 0.14
Scube3Q66PY1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scube3Q66PY1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Gm12106-201ENSMUST00000116006 1200 ntBASIC15.92■□□□□ 0.14
Scube3Q66PY1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Scube3Q66PY1 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.92■□□□□ 0.14
Scube3Q66PY1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.92■□□□□ 0.14
Scube3Q66PY1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scube3Q66PY1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.91■□□□□ 0.14
Scube3Q66PY1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Gm17968-201ENSMUST00000194902 784 ntBASIC15.91■□□□□ 0.14
Scube3Q66PY1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.91■□□□□ 0.14
Scube3Q66PY1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.91■□□□□ 0.14
Scube3Q66PY1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Scube3Q66PY1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scube3Q66PY1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms