Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SspnQ62147 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SspnQ62147 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SspnQ62147 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SspnQ62147 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SspnQ62147 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SspnQ62147 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SspnQ62147 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SspnQ62147 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
SspnQ62147 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SspnQ62147 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SspnQ62147 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SspnQ62147 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SspnQ62147 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SspnQ62147 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.73□□□□□ -0.37
SspnQ62147 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SspnQ62147 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SspnQ62147 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SspnQ62147 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.72□□□□□ -0.37
SspnQ62147 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SspnQ62147 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SspnQ62147 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SspnQ62147 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Gm12497-201ENSMUST00000138778 237 ntBASIC12.72□□□□□ -0.37
SspnQ62147 Gm27357-201ENSMUST00000183754 135 ntBASIC12.72□□□□□ -0.37
SspnQ62147 Gm17807-201ENSMUST00000186869 298 ntBASIC12.72□□□□□ -0.37
SspnQ62147 Gm19164-201ENSMUST00000210667 640 ntBASIC12.72□□□□□ -0.37
SspnQ62147 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.72□□□□□ -0.37
SspnQ62147 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SspnQ62147 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 BC037039-201ENSMUST00000192003 2205 ntBASIC12.72□□□□□ -0.37
SspnQ62147 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SspnQ62147 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SspnQ62147 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
SspnQ62147 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SspnQ62147 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.71□□□□□ -0.37
SspnQ62147 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.71□□□□□ -0.37
SspnQ62147 Gm12895-201ENSMUST00000122214 226 ntBASIC12.71□□□□□ -0.37
SspnQ62147 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.71□□□□□ -0.37
SspnQ62147 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.71□□□□□ -0.37
SspnQ62147 Gm18622-201ENSMUST00000219361 595 ntBASIC12.71□□□□□ -0.37
SspnQ62147 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
SspnQ62147 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.71□□□□□ -0.37
SspnQ62147 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SspnQ62147 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SspnQ62147 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SspnQ62147 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SspnQ62147 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SspnQ62147 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SspnQ62147 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SspnQ62147 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
SspnQ62147 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SspnQ62147 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SspnQ62147 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SspnQ62147 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SspnQ62147 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SspnQ62147 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SspnQ62147 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SspnQ62147 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.7□□□□□ -0.38
SspnQ62147 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SspnQ62147 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SspnQ62147 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SspnQ62147 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SspnQ62147 Gm12644-201ENSMUST00000119935 606 ntBASIC12.7□□□□□ -0.38
SspnQ62147 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SspnQ62147 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SspnQ62147 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SspnQ62147 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SspnQ62147 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms