Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Gm2574-201ENSMUST00000181051 1002 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Gm3200-201ENSMUST00000181493 1002 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Gm8825-201ENSMUST00000182565 998 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Gm4518-201ENSMUST00000182638 718 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Gm8330-201ENSMUST00000182754 1008 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Gm4575-201ENSMUST00000182991 1002 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Gm8709-201ENSMUST00000183230 1012 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14□□□□□ -0.17
Clcn4Q61418 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14□□□□□ -0.17
Clcn4Q61418 Cmtm5-203ENSMUST00000227441 610 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Gm10293-201ENSMUST00000076317 1002 ntBASIC14□□□□□ -0.17
Clcn4Q61418 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14□□□□□ -0.17
Clcn4Q61418 Gm6316-201ENSMUST00000082064 1020 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14□□□□□ -0.17
Clcn4Q61418 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clcn4Q61418 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Clcn4Q61418 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14□□□□□ -0.17
Clcn4Q61418 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14□□□□□ -0.17
Clcn4Q61418 Gm11839-201ENSMUST00000120647 1953 ntBASIC14□□□□□ -0.17
Clcn4Q61418 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clcn4Q61418 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Clcn4Q61418 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.99□□□□□ -0.17
Clcn4Q61418 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.99□□□□□ -0.17
Clcn4Q61418 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.99□□□□□ -0.17
Clcn4Q61418 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.99□□□□□ -0.17
Clcn4Q61418 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clcn4Q61418 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.99□□□□□ -0.17
Clcn4Q61418 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clcn4Q61418 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.99□□□□□ -0.17
Clcn4Q61418 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clcn4Q61418 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.99□□□□□ -0.17
Clcn4Q61418 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Clcn4Q61418 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clcn4Q61418 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.98□□□□□ -0.17
Clcn4Q61418 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.98□□□□□ -0.17
Clcn4Q61418 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.98□□□□□ -0.17
Clcn4Q61418 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Gm25745-201ENSMUST00000174945 133 ntBASIC13.98□□□□□ -0.17
Clcn4Q61418 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Clcn4Q61418 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.98□□□□□ -0.17
Clcn4Q61418 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.98□□□□□ -0.17
Clcn4Q61418 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Clcn4Q61418 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.98□□□□□ -0.17
Clcn4Q61418 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clcn4Q61418 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.97□□□□□ -0.17
Clcn4Q61418 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Clcn4Q61418 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.97□□□□□ -0.17
Clcn4Q61418 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Clcn4Q61418 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.97□□□□□ -0.17
Clcn4Q61418 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clcn4Q61418 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms