Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC18.2■□□□□ 0.5
Mre11Q61216 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.2■□□□□ 0.5
Mre11Q61216 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Mre11Q61216 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Mre11Q61216 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.2■□□□□ 0.5
Mre11Q61216 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.2■□□□□ 0.5
Mre11Q61216 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Mre11Q61216 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Mre11Q61216 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mre11Q61216 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.19■□□□□ 0.5
Mre11Q61216 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.19■□□□□ 0.5
Mre11Q61216 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mre11Q61216 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mre11Q61216 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mre11Q61216 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mre11Q61216 Mir1199-201ENSMUST00000117015 119 ntBASIC18.19■□□□□ 0.5
Mre11Q61216 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Mre11Q61216 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.19■□□□□ 0.5
Mre11Q61216 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mre11Q61216 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.19■□□□□ 0.5
Mre11Q61216 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mre11Q61216 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mre11Q61216 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mre11Q61216 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mre11Q61216 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC18.18■□□□□ 0.5
Mre11Q61216 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Mre11Q61216 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Mre11Q61216 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Mre11Q61216 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.18■□□□□ 0.5
Mre11Q61216 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Mre11Q61216 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Mre11Q61216 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.18■□□□□ 0.5
Mre11Q61216 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mre11Q61216 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Mre11Q61216 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
Mre11Q61216 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Gm14722-201ENSMUST00000118943 689 ntBASIC18.17■□□□□ 0.5
Mre11Q61216 Gm10052-201ENSMUST00000168019 960 ntBASIC18.17■□□□□ 0.5
Mre11Q61216 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.17■□□□□ 0.5
Mre11Q61216 Gm7729-201ENSMUST00000050143 801 ntBASIC18.17■□□□□ 0.5
Mre11Q61216 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Mre11Q61216 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Mre11Q61216 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mre11Q61216 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mre11Q61216 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mre11Q61216 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mre11Q61216 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mre11Q61216 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mre11Q61216 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Mre11Q61216 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Mre11Q61216 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mre11Q61216 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms