Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sim1Q61045 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sim1Q61045 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sim1Q61045 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.04■□□□□ -0
Sim1Q61045 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.04■□□□□ -0
Sim1Q61045 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.04■□□□□ -0
Sim1Q61045 Gm13365-201ENSMUST00000121188 973 ntBASIC15.04■□□□□ -0
Sim1Q61045 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Sim1Q61045 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.04■□□□□ -0
Sim1Q61045 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.04■□□□□ -0
Sim1Q61045 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.04■□□□□ -0
Sim1Q61045 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.04■□□□□ -0
Sim1Q61045 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sim1Q61045 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sim1Q61045 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.03■□□□□ -0
Sim1Q61045 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.03■□□□□ -0
Sim1Q61045 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.03■□□□□ -0
Sim1Q61045 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sim1Q61045 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Sim1Q61045 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sim1Q61045 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Sim1Q61045 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Sim1Q61045 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sim1Q61045 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Sim1Q61045 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.02■□□□□ -0
Sim1Q61045 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.02■□□□□ -0
Sim1Q61045 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.02■□□□□ -0
Sim1Q61045 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.02■□□□□ -0
Sim1Q61045 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.02■□□□□ -0
Sim1Q61045 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sim1Q61045 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sim1Q61045 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.02□□□□□ -0.01
Sim1Q61045 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sim1Q61045 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.02□□□□□ -0.01
Sim1Q61045 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sim1Q61045 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sim1Q61045 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sim1Q61045 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sim1Q61045 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sim1Q61045 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sim1Q61045 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sim1Q61045 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sim1Q61045 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sim1Q61045 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sim1Q61045 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sim1Q61045 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Sim1Q61045 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sim1Q61045 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms