Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-1Q5R1I8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Gm10418-201ENSMUST00000100943 576 ntBASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Gm23547-201ENSMUST00000158210 271 ntBASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-1Q5R1I8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Gm19721-201ENSMUST00000195284 1764 ntBASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-1Q5R1I8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms