Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav7-2Q5R1I3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.59
Trav7-2Q5R1I3 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.33□□□□□ -0.59
Trav7-2Q5R1I3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Trav7-2Q5R1I3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav7-2Q5R1I3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.33□□□□□ -0.59
Trav7-2Q5R1I3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Trav7-2Q5R1I3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Gm12895-201ENSMUST00000122214 226 ntBASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-2Q5R1I3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Gm12497-201ENSMUST00000138778 237 ntBASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms