Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Timm23-208ENSMUST00000226683 750 ntBASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7d-4Q5R1H9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Gm10602-201ENSMUST00000098239 609 ntBASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7d-4Q5R1H9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms