Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm45784-201ENSMUST00000188360 142 ntBASIC14.41□□□□□ -0.1
Col27a1Q5QNQ9 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.41□□□□□ -0.1
Col27a1Q5QNQ9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.41□□□□□ -0.1
Col27a1Q5QNQ9 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.41□□□□□ -0.1
Col27a1Q5QNQ9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col27a1Q5QNQ9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col27a1Q5QNQ9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col27a1Q5QNQ9 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.41□□□□□ -0.1
Col27a1Q5QNQ9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col27a1Q5QNQ9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col27a1Q5QNQ9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Col27a1Q5QNQ9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Col27a1Q5QNQ9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col27a1Q5QNQ9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Gm15393-201ENSMUST00000120499 219 ntBASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Gm27731-201ENSMUST00000185192 107 ntBASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col27a1Q5QNQ9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Gm18307-201ENSMUST00000206864 949 ntBASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col27a1Q5QNQ9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms