Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps13aQ5H8C4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Gm23931-201ENSMUST00000103842 109 ntBASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Gm14660-201ENSMUST00000119809 575 ntBASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps13aQ5H8C4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Vps13aQ5H8C4 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.83□□□□□ -0.03
Vps13aQ5H8C4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Vps13aQ5H8C4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.83□□□□□ -0.03
Vps13aQ5H8C4 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Vps13aQ5H8C4 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.83□□□□□ -0.03
Vps13aQ5H8C4 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.83□□□□□ -0.03
Vps13aQ5H8C4 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.83□□□□□ -0.03
Vps13aQ5H8C4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Vps13aQ5H8C4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps13aQ5H8C4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Vps13aQ5H8C4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Vps13aQ5H8C4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps13aQ5H8C4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.83□□□□□ -0.03
Vps13aQ5H8C4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps13aQ5H8C4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms