Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Gm2810-201ENSMUST00000118681 990 ntBASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Gm29541-201ENSMUST00000191351 678 ntBASIC16.98■□□□□ 0.31
Srrm1Q52KI8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Gm9824-201ENSMUST00000178707 561 ntBASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.97■□□□□ 0.31
Srrm1Q52KI8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.97■□□□□ 0.31
Srrm1Q52KI8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Gm7488-201ENSMUST00000117148 684 ntBASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Gm13015-201ENSMUST00000118674 204 ntBASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Gm38225-201ENSMUST00000194001 393 ntBASIC16.96■□□□□ 0.31
Srrm1Q52KI8 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.96■□□□□ 0.31
Srrm1Q52KI8 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.96■□□□□ 0.31
Srrm1Q52KI8 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.96■□□□□ 0.31
Srrm1Q52KI8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Srrm1Q52KI8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Srrm1Q52KI8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Srrm1Q52KI8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Srrm1Q52KI8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.96■□□□□ 0.3
Srrm1Q52KI8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Srrm1Q52KI8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Srrm1Q52KI8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Srrm1Q52KI8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Srrm1Q52KI8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Srrm1Q52KI8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Srrm1Q52KI8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.95■□□□□ 0.3
Srrm1Q52KI8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Srrm1Q52KI8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Srrm1Q52KI8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Srrm1Q52KI8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Srrm1Q52KI8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms