Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkl5Q3UTQ8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkl5Q3UTQ8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkl5Q3UTQ8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cdkl5Q3UTQ8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cdkl5Q3UTQ8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkl5Q3UTQ8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkl5Q3UTQ8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdkl5Q3UTQ8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdkl5Q3UTQ8 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.58■□□□□ 0.41
Cdkl5Q3UTQ8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdkl5Q3UTQ8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdkl5Q3UTQ8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cdkl5Q3UTQ8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Cdkl5Q3UTQ8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdkl5Q3UTQ8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdkl5Q3UTQ8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdkl5Q3UTQ8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdkl5Q3UTQ8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdkl5Q3UTQ8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdkl5Q3UTQ8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdkl5Q3UTQ8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.58■□□□□ 0.4
Cdkl5Q3UTQ8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.58■□□□□ 0.4
Cdkl5Q3UTQ8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.58■□□□□ 0.4
Cdkl5Q3UTQ8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdkl5Q3UTQ8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cdkl5Q3UTQ8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdkl5Q3UTQ8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdkl5Q3UTQ8 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.58■□□□□ 0.4
Cdkl5Q3UTQ8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdkl5Q3UTQ8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkl5Q3UTQ8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkl5Q3UTQ8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Gm45167-201ENSMUST00000208007 322 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms