Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Fam196aQ3USH1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Gm15806-201ENSMUST00000120696 955 ntBASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Fam196aQ3USH1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Mir1897-201ENSMUST00000122581 272 ntBASIC15.16■□□□□ 0.02
Fam196aQ3USH1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Gm46209-201ENSMUST00000217912 553 ntBASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.16■□□□□ 0.02
Fam196aQ3USH1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fam196aQ3USH1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.02
Fam196aQ3USH1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms