Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc190Q3URK1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
Ccdc190Q3URK1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Gm25016-201ENSMUST00000158399 131 ntBASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc190Q3URK1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Gm13836-201ENSMUST00000121159 501 ntBASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Ccdc190Q3URK1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms